Raes Lab Publications | VIB-KU Leuven Center for Microbiology

Publications

To showcase the world-class scientific research of the Jeroen Raes Lab, you can discover their scientific papers in more detail.

All our publications

Faecal Metaproteomic Analysis Reveals a Personalized and Stable Functional Microbiome and Limited Effects of a Probiotic Intervention in Adults

Kolmeder C, Salojarvi J, Ritari J, De B, Raes J, Falony G, Araujo Vieira Da Silva S, Kekkonen R, Corthals G, Palva A, Salonen A, De V

PLoS One

e0153294

2016

IPED: a highly efficient denoising tool for Illumina MiSeq Paired-end 16S rRNA gene amplicon sequencing data

Mysara M, Leys N, Raes J, Monsieurs P

BMC BIOINFORMATICS

192

2016

Meta-omics in Inflammatory Bowel Disease Research: Applications, Challenges, and Guidelines

Vallès Colomer M*, El Darzi Y*, Araujo Vieira Da Silva S, Falony G, Raes J@, Joossens M@

J CROHNS COLITIS

735-46

2016

Donor Species Richness Determines Faecal Microbiota Transplantation Success in Inflammatory Bowel Disease

Vermeire S, Joossens M, Verbeke K, Wang J, Machiels K, Sabino J, Ferrante M, Van A, Rutgeerts P, Raes J@

J CROHNS COLITIS

387-94

2016

Species-sorting and mass-transfer paradigms control managed natural metacommunities

Gunther S, Faust K, Schumann J, Harms H, Raes J, Muller S

ENVIRON MICROBIOL

4862-4877

2016

Species-function relationships shape ecological properties of the human gut microbiome

Araujo Vieira Da Silva S*, Falony G*, El Darzi Y, Lima Mendez G, Garcia Y, Okuda S, Vandeputte D, Vallès Colomer M, Hildebrand F, Chaffron S, Raes J@

NAT MICROBIOL

16088

2016

Heritable components of the human fecal microbiome are associated with visceral fat

Beaumont M, Goodrich J, Jackson M, Yet I, Davenport E, Araujo Vieira Da Silva S, Debelius J, Pallister T, Mangino M, Raes J, Knight R, Clark A, Ley R, SPECTOR T°, Bell J

GENOME BIOL

189

2016

Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton

Cornejo-castillo F, Cabello A, Salazar G, Sanchez-baracaldo P, Lima Mendez G, Hingamp P, Alberti A, Sunagawa S, Bork P, De V, Raes J, Bowler C, Wincker P, Zehr J, Gasol J, Massana R, Acinas S

Nat Commun

11071

2016

Computational approaches to predict bacteriophage-host relationships

Edwards R, Mcnair K, Faust K, Raes J, Dutilh B

FEMS MICROBIOL REV

258-72

2016

Towards biome-specific analysis of meta-omics data

El Darzi Y, Falony G, Araujo Vieira Da Silva S, Raes J@

ISME J

1025-8

2016

Raes Lab

Publications

All our publications

Faecal Metaproteomic Analysis Reveals a Personalized and Stable Functional Microbiome and Limited Effects of a Probiotic Intervention in Adults

IPED: a highly efficient denoising tool for Illumina MiSeq Paired-end 16S rRNA gene amplicon sequencing data

Meta-omics in Inflammatory Bowel Disease Research: Applications, Challenges, and Guidelines

Donor Species Richness Determines Faecal Microbiota Transplantation Success in Inflammatory Bowel Disease

Species-sorting and mass-transfer paradigms control managed natural metacommunities

Species-function relationships shape ecological properties of the human gut microbiome

Heritable components of the human fecal microbiome are associated with visceral fat

Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton

Computational approaches to predict bacteriophage-host relationships

Towards biome-specific analysis of meta-omics data

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